Index

Symbols

--all residem_pymol_image command line option --alpha residem command line option --atom_profile residem command line option --box residem_extract_around_model command line option --carve residem_pymol_image command line option --ccp4_scaling_method residem command line option --closeness residem_svd_csv command line option --cmap residem_svd_csv command line option --cutoff residem_svd_csv command line option --default residem command line option --dist residem_svd_csv command line option --ew residem_svd_csv command line option --fcalclabel residem command line option --file residem_svd_csv command line option --help residem command line option residem_coot command line option residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option --high residem command line option --low residem command line option residem_svd_csv command line option --map residem_coot command line option residem_extract_around_model command line option residem_pymol_image command line option --map_type residem_svd_csv command line option --medium residem_svd_csv command line option --mtz residem command line option --ncmap residem_svd_csv command line option --negative residem_pymol_image command line option --norm residem_svd_csv command line option --output residem_extract_around_model command line option residem_pymol_image command line option --pdb residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option --phil residem command line option --positive residem_pymol_image command line option --radius residem_extract_around_model command line option --ref residem command line option residem_coot command line option --refl residem command line option --resi residem_pymol_image command line option --residue residem_svd_csv command line option --rot_x residem_pymol_image command line option --rot_y residem_pymol_image command line option --rot_z residem_pymol_image command line option --scale residem command line option --scaling_method residem command line option --selection residem_extract_around_model command line option --sigma residem command line option residem_pymol_image command line option

--tmtz residem command line option --tril residem command line option --weight residem command line option -all residem_pymol_image command line option -b residem_extract_around_model command line option -c residem_pymol_image command line option residem_svd_csv command line option -cs residem command line option -d residem command line option residem_extract_around_model command line option residem_svd_csv command line option -f residem_svd_csv command line option -fl residem command line option -h residem command line option residem_coot command line option residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option -hi residem command line option -i residem_svd_csv command line option -k residem_svd_csv command line option -l residem command line option residem_svd_csv command line option -m residem command line option residem_coot command line option residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option -n residem_pymol_image command line option residem_svd_csv command line option -o residem_extract_around_model command line option residem_pymol_image command line option -p residem command line option residem_pymol_image command line option -r residem command line option residem_coot command line option residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option -resi residem_pymol_image command line option -rl residem command line option -s residem command line option residem_extract_around_model command line option residem_pymol_image command line option residem_svd_csv command line option -sm residem command line option -t residem command line option residem_svd_csv command line option -tl residem command line option -v residem command line option -w residem command line option -ws residem command line option -x residem_pymol_image command line option -y residem_pymol_image command line option -z residem_pymol_image command line option residem_svd_csv command line option

R

residem command line option --alpha --atom_profile --ccp4_scaling_method --default --fcalclabel --help --high --low --mtz --phil --ref --refl --scale --scaling_method --sigma --tmtz --tril --weight -cs -d -fl -h -hi -l -m -p -r -rl -s -sm -t -tl -v -w -ws residem_coot command line option --help --map --ref -h -m -r residem_extract_around_model command line option --box --help --map --output --pdb --radius --selection -b -d -h -m -o -r -s

residem_pymol_image command line option --all --carve --help --map --negative --output --pdb --positive --resi --rot_x --rot_y --rot_z --sigma -all -c -h -m -n -o -p -r -resi -s -x -y -z residem_svd_csv command line option --closeness --cmap --cutoff --dist --ew --file --help --low --map_type --medium --ncmap --norm --pdb --residue -c -d -f -h -i -k -l -m -n -r -s -t -z